BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB025H09SP1|AL428463
(887 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1642 1143 0.0
>3x_Contig1642
Length = 16641
Score = 1143 bits (567), Expect = 0.0
Identities = 625/651 (96%), Gaps = 5/651 (0%)
Strand = Plus / Minus
Query: 5 agaaagaattgctagaytcgcctttgatttcgccttgaaaaacaacagaaartmggtctg 64
|||||||||||||||| |||||||||||||||||||||||||||||||||| | ||||||
Sbjct: 668 agaaagaattgctagattcgcctttgatttcgccttgaaaaacaacagaaagtcggtctg 609
Query: 65 cgcwgttcacaaagctaamatcawgaaattgggtgawggttwgttcagaaacaccgttaa 124
||| |||||||||||||| |||| |||||||||||| |||| ||||||||||||||||||
Sbjct: 608 cgctgttcacaaagctaacatcatgaaattgggtgatggtttgttcagaaacaccgttaa 549
Query: 125 tgaaawtggtgctaacgaatacccagaactcgatgtmaagaamatcatcgttgamaacgc 184
||||| |||||||||||||||||||||||||||||| ||||| ||||||||||| |||||
Sbjct: 548 tgaaattggtgctaacgaatacccagaactcgatgtcaagaacatcatcgttgacaacgc 489
Query: 185 ttccatgcaarckgttgcmaagccacatcaattcgatgttttrgtgacaccaaacttgta 244
|||||||||| | ||||| ||||||||||||||||||||||| |||||||||||||||||
Sbjct: 488 ttccatgcaagctgttgccaagccacatcaattcgatgttttggtgacaccaaacttgta 429
Query: 245 cggttctatcttgggtaacattggttctgctttgatcggtggtcccgcgtctagtcccag 304
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 428 cggttctatcttgggtaacattggttctgctttgatcggtggtcccg-gtctagtcccag 370
Query: 305 agtgctaacttcggtagagaawacgctgtctttgaaccaggttccagacatgttggtttg 364
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 369 -gtgctaacttcggtagagaatacgctgtctttgaaccaggttccagacatgttggtttg 311
Query: 365 gacatcaagggtcaaaacgttgctaacccaactgckatgatcttgtcctctacatctaca 424
||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||| |
Sbjct: 310 gacatcaagggtcaaaacgttgctaacccaactgctatgatcttgtcctctac-tcta-a 253
Query: 425 tgttgagacatctaggtttgaacagcttacgctgatagaatttccaaagctacatatgat 484
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 252 tgttgagacatctaggtttgaac-gcttacgctgatagaatttccaaagctacatatgat 194
Query: 485 gtcattwctgaaggtaagttaacaacaagagacatcggtggttcagcctccacttctgag 544
|||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 gtcatttctgaaggtaagtcaacaacaagagacatcggtggttcagcctccacttctgag 134
Query: 545 ttcaccaacgctgttatcgagaagttagccaagttatgatcacatcaaggaaattatgac 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133 ttcaccaacgctgttatcgagaagttagccaagttatgatcacatcaaggaaattatgac 74
Query: 605 atctttttatccacacaaaacaaataaaagaaawttgatccttataatatc 655
||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 73 atctttttatccacacaaaacaaataaaagaaatttgatccttataatatc 23
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.40 0.714 1.33
Gapped
Lambda K H
1.40 0.714 1.33
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5502
Number of Sequences: 1807
Number of extensions: 5502
Number of successful extensions: 123
Number of sequences better than 1.0e-20: 1
length of query: 887
length of database: 10,358,551
effective HSP length: 16
effective length of query: 871
effective length of database: 10,329,639
effective search space: 8997115569
effective search space used: 8997115569
T: 0
A: 40
X1: 5 (10.1 bits)
X2: 14 (28.2 bits)
S1: 12 (24.7 bits)
S2: 50 (101.3 bits)